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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20796112_20798779_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20796112 - 20798779

Intron Length:

2668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGCTCA

5'SS Class:

major

3'SS Sequence:

CTTTAATATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTTGCTTTAATA

Flanking Amino Acid:

KLRRIWEPTYTIMYREMKDS

Intron Amino Acid Position:

1832

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.3

68.6

39.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

71.4

0.48

63.4

Minor 5ss

45.5

-0.5

2.7

56.2

41.6

Minor BPS

70.5

0.64

1.4

74.34

38.4

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002489

20749688 - 20808882

59195

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195