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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20800022_20802195_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20800022 - 20802195

Intron Length:

2174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCGTAT

5'SS Class:

weak_major

3'SS Sequence:

TTTTAAAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTCTTTTAAAA

Flanking Amino Acid:

ITTKILQQIEEPLALASGAL

Intron Amino Acid Position:

2011

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

68.3

39.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.2

0.54

67.6

41.6

Minor 5ss

50.2

0.01

2.9

72.7

44.5

Minor BPS

62.4

0.39

1.4

69.31

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195

ENSAPLT00000038197

20749688 - 20808882

59195