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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2080486_2081270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2080486 - 2081270

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATTCC

5'SS Class:

major

3'SS Sequence:

TTCCTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

AATTACTGTACA

Flanking Amino Acid:

ASENHQEILKDKKLIKALFD

Intron Amino Acid Position:

918

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

70.9

33.7

Major BPS

60.3

0.26

65.5

Major PPT

86.4

0.82

0.7

80.4

31.6

Minor 5ss

46.9

-0.3

2.5

62.3

42.5

Minor BPS

49.2

-0

65.41

40.2

Associated Gene:

Gene:

SCUBE2

Ensembl Gene ID:

ENSAPLG00000002698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027922

2043826 - 2081423

37598

ENSAPLT00000002752

2044133 - 2081423

37291