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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20805915_20806228_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20805915 - 20806228

Intron Length:

314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTTC

5'SS Class:

strong_major

3'SS Sequence:

GTATAAATTAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TCTTGTATAAAT

Flanking Amino Acid:

GIQKQMEAFRDGFNRVFPME

Intron Amino Acid Position:

2427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

84.2

27.6

Major BPS

74.5

0.61

79.6

29.1

Major PPT

56.6

0.15

1.2

53.9

43.8

Minor 5ss

44.8

-0.6

2.8

61.7

43.1

Minor BPS

49.3

0.03

2.1

73.73

43.2

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002489

20749688 - 20808882

59195

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195