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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20806380_20807598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20806380 - 20807598

Intron Length:

1219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGTC

5'SS Class:

strong_major

3'SS Sequence:

AATTTATTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATT

Flanking Amino Acid:

TEPKLGYTRDSPGFLRFVRV

Intron Amino Acid Position:

2477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

81.6

30.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.4

0.46

1.1

73.2

40.5

Minor 5ss

37.3

-1.4

3.3

52.6

44.6

Minor BPS

80.4

1.03

0.9

89.47

28.1

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195