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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20807744_20808098_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20807744 - 20808098

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTGTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATCAAT

U12 Branch Point Sequence:

GCAGTATCAATT

Flanking Amino Acid:

LHPRLTVVRKVDATDASYPS

Intron Amino Acid Position:

2526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

78.6

35.4

Major BPS

69.1

0.47

1.2

34.1

Major PPT

80.8

0.69

0.8

79.5

32.5

Minor 5ss

41.2

-1

3.7

63.6

48.1

Minor BPS

43.7

-0.4

1.8

54.39

41.4

Associated Gene:

Gene:

HECTD1

Ensembl Gene ID:

ENSAPLG00000002424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038197

20749688 - 20808882

59195

ENSAPLT00000029236

20749688 - 20808882

59195

ENSAPLT00000002489

20749688 - 20808882

59195