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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20857622_20858926_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20857622 - 20858926

Intron Length:

1305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

CACTATCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

ATGTCACTATCT

Flanking Amino Acid:

GDLKMPTFESEETKDTEVPA

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

0.61

0.9

73.1

36.6

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

48.1

-0

2.2

72.62

43.7

Associated Gene:

Gene:

STRN3

Ensembl Gene ID:

ENSAPLG00000016038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017361

20832853 - 20890526

57674

ENSAPLT00000016764

20832853 - 20890526

57674

ENSAPLT00000039208

20832853 - 20890526

57674