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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20859009_20859308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20859009 - 20859308

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TTAATGTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTCTTGTTAATG

Flanking Amino Acid:

TWKQGRQLLRQYLQEVGYTD

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.9

39.9

Major BPS

84.4

0.85

34.5

Major PPT

66.9

0.38

1.1

61.4

44.3

Minor 5ss

39.6

-1.2

2.9

57.1

41.1

Minor BPS

57.2

0.09

2.1

66.07

42.7

Associated Gene:

Gene:

STRN3

Ensembl Gene ID:

ENSAPLG00000016038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017361

20832853 - 20890526

57674

ENSAPLT00000016764

20832853 - 20890526

57674

ENSAPLT00000039208

20832853 - 20890526

57674