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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20859489_20859918_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20859489 - 20859918

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGTTTTTATTT

Flanking Amino Acid:

SSKQKGQEIKRNSGDVLETF

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

22.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.6

0.84

0.7

81.3

36.3

Minor 5ss

-2.1

3.1

39.9

46.1

Minor BPS

59.2

0.37

1.5

73.08

38.9

Associated Gene:

Gene:

STRN3

Ensembl Gene ID:

ENSAPLG00000016038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039208

20832853 - 20890526

57674

ENSAPLT00000017361

20832853 - 20890526

57674

ENSAPLT00000016764

20832853 - 20890526

57674