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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20884959_20886107_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20884959 - 20886107

Intron Length:

1149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCCAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAA

U12 Branch Point Sequence:

TATCAGTAAACT

Flanking Amino Acid:

VEPIYTFRAHIGPVLSLAIS

Intron Amino Acid Position:

563

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

55.1

0.13

1.2

57.3

36.3

Major PPT

0.41

0.9

63.4

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

46.2

-0.2

2.4

71.79

44.5

Associated Gene:

Gene:

STRN3

Ensembl Gene ID:

ENSAPLG00000016038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017361

20832853 - 20890526

57674

ENSAPLT00000016764

20832853 - 20890526

57674

ENSAPLT00000039208

20832853 - 20890526

57674