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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20906105_20906453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20906105 - 20906453

Intron Length:

349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAGGTGTC

5'SS Class:

major

3'SS Sequence:

AATATTTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TATAAATTAATT

Flanking Amino Acid:

TRWASSFSVTPTKNVALEVV

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.4

0.29

1.4

64.4

41.4

Major BPS

0.82

0.8

24.9

Major PPT

70.3

0.46

1.1

66.1

44.3

Minor 5ss

37.4

-1.4

3.6

52.1

39.8

Minor BPS

0.3

1.8

76.76

39.1

Associated Gene:

Gene:

COCH

Ensembl Gene ID:

ENSAPLG00000015813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016508

20900472 - 20918167

17696