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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20951823_20952834_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20951823 - 20952834

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCACGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

TGTCTCTTCACG

Flanking Amino Acid:

LFNATQFIKQLSQLGQK*

Intron Amino Acid Position:

626

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

78.8

35.5

Major BPS

77.5

0.68

79.6

Major PPT

75.6

0.58

0.9

35.4

Minor 5ss

35.6

-1.6

2.9

42.3

Minor BPS

57.4

0.09

1.9

65.22

42.5

Associated Gene:

Gene:

SCFD1

Ensembl Gene ID:

ENSAPLG00000015536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039888

20951799 - 20994631

42833

ENSAPLT00000016207

20951799 - 20994631

42833