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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20952904_20956069_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20952904 - 20956069

Intron Length:

3166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTATTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

TCTTCCTGACTT

Flanking Amino Acid:

EYQNLIDYIKGKQGKHVLYG

Intron Amino Acid Position:

603

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.5

40.4

Major BPS

0.55

1.1

63.4

44.3

Major PPT

83.6

0.76

0.8

85.6

27.4

Minor 5ss

-1.7

2.8

43.3

43.8

Minor BPS

63.1

0.49

1.8

80.5

41.8

Associated Gene:

Gene:

SCFD1

Ensembl Gene ID:

ENSAPLG00000015536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039888

20951799 - 20994631

42833

ENSAPLT00000016207

20951799 - 20994631

42833