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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20956136_20957380_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20956136 - 20957380

Intron Length:

1245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATATTCTGATTG

Flanking Amino Acid:

VPRNKNPFQEAIVFVVGGGN

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.1

1.09

0.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

74.4

0.55

0.9

71.1

39.6

Minor 5ss

35.9

-1.6

49.5

46.7

Minor BPS

48.7

-0.2

1.7

55.16

40.3

Associated Gene:

Gene:

SCFD1

Ensembl Gene ID:

ENSAPLG00000015536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016207

20951799 - 20994631

42833

ENSAPLT00000039888

20951799 - 20994631

42833