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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20958596_20963206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20958596 - 20963206

Intron Length:

4611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TGCTTTTTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAAAC

Flanking Amino Acid:

DNLMEMKSNPETDDYRYFDP

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

76.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

75.9

0.58

0.9

73.2

Minor 5ss

36.8

-1.5

2.9

52.2

44.4

Minor BPS

64.6

0.44

1.5

76.07

33.6

Associated Gene:

Gene:

SCFD1

Ensembl Gene ID:

ENSAPLG00000015536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016207

20951799 - 20994631

42833

ENSAPLT00000039888

20951799 - 20994631

42833