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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20964239_20965182_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20964239 - 20965182

Intron Length:

944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTTGTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

TCATCTTTATTT

Flanking Amino Acid:

SYGNTTPKPLGLFSRVMNTG

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

71.4

41.2

Major BPS

79.4

0.73

80.1

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

0.64

2.2

73.3

43.5

Minor BPS

64.2

0.52

1.6

76.15

41.3

Associated Gene:

Gene:

SCFD1

Ensembl Gene ID:

ENSAPLG00000015536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039888

20951799 - 20994631

42833

ENSAPLT00000016207

20951799 - 20994631

42833