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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20965246_20965812_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20965246 - 20965812

Intron Length:

567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TGATCTCTACCC

Flanking Amino Acid:

LAPLNYIKQWKAFTKMASAP

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

77.1

0.61

0.8

33.3

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

49.7

-0

1.9

64.69

40.7

Associated Gene:

Gene:

SCFD1

Ensembl Gene ID:

ENSAPLG00000015536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039888

20951799 - 20994631

42833

ENSAPLT00000016207

20951799 - 20994631

42833