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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20978471_20979348_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20978471 - 20979348

Intron Length:

878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

AGTGTTGCATTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

GTTGATTTAACT

Flanking Amino Acid:

SDKFWQKHKGSPFPEVAESV

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

87.9

29.3

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

58.7

0.2

56.5

43.9

Minor 5ss

49.8

-0

2.8

73.2

43.7

Minor BPS

66.3

0.59

1.6

81.57

39.9

Associated Gene:

Gene:

SCFD1

Ensembl Gene ID:

ENSAPLG00000015536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016207

20951799 - 20994631

42833

ENSAPLT00000039888

20951799 - 20994631

42833