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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20984800_20985679_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20984800 - 20985679

Intron Length:

880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTTCCCCCTACA

Flanking Amino Acid:

RGTAAEMVAVKLDKKLRENL

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

82.5

29.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

83.7

0.76

0.7

77.2

24.9

Minor 5ss

35.3

-1.7

3.1

46.4

Minor BPS

48.3

-0.1

2.2

70.79

40.5

Associated Gene:

Gene:

SCFD1

Ensembl Gene ID:

ENSAPLG00000015536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039888

20951799 - 20994631

42833

ENSAPLT00000016207

20951799 - 20994631

42833