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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20985736_20986895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20985736 - 20986895

Intron Length:

1160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATATCTTTTATT

Flanking Amino Acid:

DSLFCFFVTLGAIPIIRCSR

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

77.8

0.62

0.9

78.5

34.3

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

64.9

0.55

1.6

78.82

37.8

Associated Gene:

Gene:

SCFD1

Ensembl Gene ID:

ENSAPLG00000015536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016207

20951799 - 20994631

42833

ENSAPLT00000039888

20951799 - 20994631

42833