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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20986986_20988152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20986986 - 20988152

Intron Length:

1167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TACACCATTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

CTGATTTTAACT

Flanking Amino Acid:

NQNKELVSYRAINRPDITDT

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

89.7

0.98

0.7

89.9

Major PPT

67.2

0.39

0.9

63.3

37.7

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

66.5

0.59

1.3

75.56

41.7

Associated Gene:

Gene:

SCFD1

Ensembl Gene ID:

ENSAPLG00000015536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039888

20951799 - 20994631

42833

ENSAPLT00000016207

20951799 - 20994631

42833