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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20990277_20991195_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20990277 - 20991195

Intron Length:

919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTCTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGAAAT

U12 Branch Point Sequence:

TGCACTAGAAAT

Flanking Amino Acid:

ELRDMGITLHLLLHSDRDPI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

59.4

0.23

1.2

65.3

38.6

Major PPT

93.1

0.97

0.6

18.6

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

44.7

-0.3

1.8

60.95

Associated Gene:

Gene:

SCFD1

Ensembl Gene ID:

ENSAPLG00000015536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039888

20951799 - 20994631

42833

ENSAPLT00000016207

20951799 - 20994631

42833