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Intron Name: Anas_platyrhynchos_platyrhynchos_5_20991285_20992042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20991285 - 20992042

Intron Length:

758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

GTATCTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TACATCATAAAA

Flanking Amino Acid:

KNSTGEPVWKVLIYDRFGQD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

76.6

0.6

73.2

41.8

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

48.6

-0.1

1.7

59.44

39.7

Associated Gene:

Gene:

SCFD1

Ensembl Gene ID:

ENSAPLG00000015536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016207

20951799 - 20994631

42833

ENSAPLT00000039888

20951799 - 20994631

42833