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Intron Name: Anas_platyrhynchos_platyrhynchos_5_21000993_21001176_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21000993 - 21001176

Intron Length:

184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

AAATTCCTAACT

Flanking Amino Acid:

DTDVAQTIKKIKYSSSLSSL

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

81.9

0.72

0.9

37.4

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

63.2

0.49

1.7

77.38

38.2

Associated Gene:

Gene:

G2E3

Ensembl Gene ID:

ENSAPLG00000015236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015901

20997356 - 21013939

16584