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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2105276_2107171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2105276 - 2107171

Intron Length:

1896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCAACGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTGTTTTCAACG

Flanking Amino Acid:

LMSSACLDRLGLKEHLEALP

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

72.9

0.52

66.6

39.3

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

61.8

0.23

1.6

66.75

41.5

Associated Gene:

Gene:

NRIP3

Ensembl Gene ID:

ENSAPLG00000003345

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003404

2097245 - 2107811

10567