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Intron Name: Anas_platyrhynchos_platyrhynchos_5_21079907_21082422_F

Intron Information:

Intron Rank:

128900

Intron Class:

major

Intron Phase:

Intron Coordinates:

21079907 - 21082422

Intron Length:

2516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACGAAA

U12 Branch Point Sequence:

AAGTACGAAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

52.6

0.06

1.3

61.9

33.9

Major PPT

79.9

0.67

0.8

77.7

36.7

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

37.9

-0.9

2.4

47.44

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028193

21079705 - 21082487

2783