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Intron Name: Anas_platyrhynchos_platyrhynchos_5_21258_28271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21258 - 28271

Intron Length:

7014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGGTG

5'SS Class:

major

3'SS Sequence:

CCTTGGACTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

GTTCCTTGGACT

Flanking Amino Acid:

IYLRITGRSPRMMKTISRLH

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

69.7

40.9

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

65.9

0.36

0.9

58.8

Minor 5ss

32.9

-2

3.6

46.5

48.8

Minor BPS

61.9

0.46

1.5

78.46

37.4

Associated Gene:

Gene:

FAR1

Ensembl Gene ID:

ENSAPLG00000005107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037805

6668 - 51974

45307

ENSAPLT00000005315

16966 - 51974

35009