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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2129317_2132728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2129317 - 2132728

Intron Length:

3412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAG

U12 Branch Point Sequence:

CATCTCAGAGCT

Flanking Amino Acid:

IYNKNVSQKDCDCLHVVEPM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

62.2

0.3

1.5

71.4

36.6

Major PPT

0.77

0.8

81.4

30.7

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

43.4

-0.4

1.9

60.54

42.4

Associated Gene:

Gene:

TMEM9B

Ensembl Gene ID:

ENSAPLG00000003457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003518

2128862 - 2137468

8607