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Intron Name: Anas_platyrhynchos_platyrhynchos_5_21336019_21338888_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21336019 - 21338888

Intron Length:

2870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGCAAT

5'SS Class:

major

3'SS Sequence:

CTTCCTGTCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAATT

Flanking Amino Acid:

SPSMPDEVLLSPVSPGYEQK

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

72.3

38.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

78.2

0.63

0.8

32.5

Minor 5ss

47.3

-0.3

2.6

62.6

43.4

Minor BPS

73.1

0.8

1.3

88.05

30.7

Associated Gene:

Gene:

PRKD1

Ensembl Gene ID:

ENSAPLG00000014715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024900

21248266 - 21373696

125431

ENSAPLT00000020768

21329055 - 21390833

61779

ENSAPLT00000015405

21248266 - 21390833

142568

ENSAPLT00000042332

21271290 - 21373696

102407

ENSAPLT00000032535

21248266 - 21369986

121721