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Intron Name: Anas_platyrhynchos_platyrhynchos_5_21338913_21347290_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21338913 - 21347290

Intron Length:

8378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

ATGTATTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTATTTGAAAT

Flanking Amino Acid:

LLSPVSPGYEQKTPSESFTG

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

86.2

29.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.2

0.57

0.9

68.9

41.1

Minor 5ss

44.5

-0.6

2.5

60.9

43.5

Minor BPS

54.5

0.22

1.5

73.1

37.3

Associated Gene:

Gene:

PRKD1

Ensembl Gene ID:

ENSAPLG00000014715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020768

21329055 - 21390833

61779

ENSAPLT00000015405

21248266 - 21390833

142568

ENSAPLT00000042332

21271290 - 21373696

102407

ENSAPLT00000032535

21248266 - 21369986

121721

ENSAPLT00000024900

21248266 - 21373696

125431