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Intron Name: Anas_platyrhynchos_platyrhynchos_5_21347502_21349192_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21347502 - 21349192

Intron Length:

1691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTGCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTGTAT

U12 Branch Point Sequence:

TTTTGCTGTATT

Flanking Amino Acid:

GLFRQGLQCKDCRFNCHKRC

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

46.5

-0.2

1.5

45.3

47.5

Major PPT

67.7

0.4

1.2

42.6

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

52.1

0.15

2.2

80.68

41.2

Associated Gene:

Gene:

PRKD1

Ensembl Gene ID:

ENSAPLG00000014715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024900

21248266 - 21373696

125431

ENSAPLT00000020768

21329055 - 21390833

61779

ENSAPLT00000020094

21248266 - 21373696

125431

ENSAPLT00000042332

21271290 - 21373696

102407

ENSAPLT00000015405

21248266 - 21390833

142568

ENSAPLT00000032535

21248266 - 21369986

121721