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Intron Name: Anas_platyrhynchos_platyrhynchos_5_21349271_21352090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21349271 - 21352090

Intron Length:

2820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TATAATATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAGATATTAATT

Flanking Amino Acid:

NCLGEVAINGDLLSPGAESD

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.2

30.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

73.5

0.53

63.3

46.4

Minor 5ss

33.5

-1.9

2.9

40.7

45.5

Minor BPS

56.3

0.28

1.6

70.76

40.2

Associated Gene:

Gene:

PRKD1

Ensembl Gene ID:

ENSAPLG00000014715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024900

21248266 - 21373696

125431

ENSAPLT00000020768

21329055 - 21390833

61779

ENSAPLT00000020094

21248266 - 21373696

125431

ENSAPLT00000042332

21271290 - 21373696

102407

ENSAPLT00000015405

21248266 - 21390833

142568

ENSAPLT00000032535

21248266 - 21369986

121721