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Intron Name: Anas_platyrhynchos_platyrhynchos_5_21359968_21360866_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21359968 - 21360866

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGTGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATG

Flanking Amino Acid:

GSGQFGIVYGGKHRKTGRDV

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.6

42.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.7

0.67

74.8

38.9

Minor 5ss

37.4

-1.4

3.5

48.2

Minor BPS

71.2

0.53

1.3

70.08

38.2

Associated Gene:

Gene:

PRKD1

Ensembl Gene ID:

ENSAPLG00000014715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024900

21248266 - 21373696

125431

ENSAPLT00000020768

21329055 - 21390833

61779

ENSAPLT00000020094

21248266 - 21373696

125431

ENSAPLT00000042332

21271290 - 21373696

102407

ENSAPLT00000015405

21248266 - 21390833

142568

ENSAPLT00000032535

21248266 - 21369986

121721