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Intron Name: Anas_platyrhynchos_platyrhynchos_5_21371530_21373403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21371530 - 21373403

Intron Length:

1874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGCTG

5'SS Class:

major

3'SS Sequence:

TACTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

ATTACTTTATTT

Flanking Amino Acid:

DKTLSHPWLQDYQTWLDLRE

Intron Amino Acid Position:

818

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

58.9

45.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

83.8

0.76

0.8

81.6

34.3

Minor 5ss

40.5

-1.1

3.3

55.9

48.3

Minor BPS

0.49

1.6

78.87

37.7

Associated Gene:

Gene:

PRKD1

Ensembl Gene ID:

ENSAPLG00000014715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042332

21271290 - 21373696

102407

ENSAPLT00000024900

21248266 - 21373696

125431

ENSAPLT00000020094

21248266 - 21373696

125431