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Intron Name: Anas_platyrhynchos_platyrhynchos_5_21479289_21489785_F

Intron Information:

Intron Rank:

130254

Intron Class:

major

Intron Phase:

Intron Coordinates:

21479289 - 21489785

Intron Length:

10497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGATTGTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

100

1.24

0.5

100

Major PPT

85.7

0.8

0.6

84.7

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

56.6

0.2

68.34

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034685

21478955 - 21490605

11651