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Intron Name: Anas_platyrhynchos_platyrhynchos_5_21589218_21596324_R

Intron Information:

Intron Rank:

146740

Intron Class:

major

Intron Phase:

Intron Coordinates:

21589218 - 21596324

Intron Length:

7107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GCTTGTTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

69.3

33.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

84.7

0.78

0.7

30.9

Minor 5ss

-2.2

3.4

42.5

44.5

Minor BPS

55.2

0.24

1.8

70.84

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026274

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027097

21589011 - 21605856

16846

ENSAPLT00000022494

21589011 - 21613376

24366