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Intron Name: Anas_platyrhynchos_platyrhynchos_5_21596392_21605519_R

Intron Information:

Intron Rank:

146743

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21596392 - 21605519

Intron Length:

9128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTATGTATA

5'SS Class:

weak_major

3'SS Sequence:

TGTGTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAC

U12 Branch Point Sequence:

GTCTCCTAGAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.3

72.4

38.6

Major BPS

57.5

0.19

1.1

55.1

40.5

Major PPT

82.4

0.73

0.9

73.5

41.8

Minor 5ss

46.9

-0.3

2.5

39.1

Minor BPS

47.8

-0.3

2.1

54.9

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026274

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027097

21589011 - 21605856

16846