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Intron Name: Anas_platyrhynchos_platyrhynchos_5_22000140_22005392_F

Intron Information:

Intron Rank:

126049

Intron Class:

major

Intron Phase:

Intron Coordinates:

22000140 - 22005392

Intron Length:

5253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GCATTATTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

82.6

24.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

93.5

0.98

0.7

92.3

26.6

Minor 5ss

38.9

-1.3

2.9

47.2

Minor BPS

56.3

0.19

1.6

61.67

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039217

21997648 - 22005662

8015

ENSAPLT00000027063

21997143 - 22005662

8520