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Intron Name: Anas_platyrhynchos_platyrhynchos_5_22393817_22436247_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

22393817 - 22436247

Intron Length:

42431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTTACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAA

U12 Branch Point Sequence:

AATTTTTTACCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.7

86.9

22.8

Major BPS

70.6

0.51

73.3

31.3

Major PPT

77.7

0.62

71.1

43.3

Minor 5ss

41.5

-0.9

3.1

48.2

Minor BPS

0.37

1.5

70.12

36.2

Associated Gene:

Gene:

NOVA1

Ensembl Gene ID:

ENSAPLG00000008154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045876

22393740 - 22522859

129120

ENSAPLT00000043808

22386128 - 22522237

136110