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Intron Name: Anas_platyrhynchos_platyrhynchos_5_22393817_22492401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

22393817 - 22492401

Intron Length:

98585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.7

86.9

22.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.2

0.95

0.7

88.5

28.4

Minor 5ss

41.5

-0.9

3.1

48.2

Minor BPS

64.7

0.54

1.5

79.8

36.8

Associated Gene:

Gene:

NOVA1

Ensembl Gene ID:

ENSAPLG00000008154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035578

22393740 - 22522859

129120