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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2272199_2275051_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2272199 - 2275051

Intron Length:

2853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAGC

5'SS Class:

strong_major

3'SS Sequence:

TAAATGTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TGTTTGTTAAAT

Flanking Amino Acid:

KTFLPGAGNEVIELRRPMDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.3

37.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

65.8

0.36

1.1

62.1

47.9

Minor 5ss

33.2

-1.9

43.7

43.6

Minor BPS

59.7

0.38

2.1

81.62

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003618

2272109 - 2296569

24461