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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2294410_2295403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2294410 - 2295403

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GGTGTCTTACTG

Flanking Amino Acid:

NQDSDSDSDDECNTLNGLVS

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

85.1

0.79

0.8

79.6

32.3

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

48.4

-0.2

1.8

51.88

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003618

2272109 - 2296569

24461