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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2295644_2296021_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2295644 - 2296021

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCCAT

U12 Branch Point Sequence:

CCAGCCCCATCT

Flanking Amino Acid:

DRELRKCRAKGLFEQRVEQY

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

46.8

-0.2

1.4

54.3

42.9

Major PPT

70.8

0.47

0.8

63.8

31.4

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

40.4

-0.6

2.1

53.43

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003618

2272109 - 2296569

24461