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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2303705_2304194_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2303705 - 2304194

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCGGG

5'SS Class:

major

3'SS Sequence:

TTCTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

ATATTCTCAGTC

Flanking Amino Acid:

GHVSHGHGRIGKHRKHPGGR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

58.3

46.6

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

0.88

0.6

88.7

20.7

Minor 5ss

36.2

-1.6

3.4

47.3

48.1

Minor BPS

49.7

-0

1.7

61.69

37.8

Associated Gene:

Gene:

RPL27A

Ensembl Gene ID:

ENSAPLG00000004088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004186

2303638 - 2306536

2899