Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_23066094_23071197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23066094 - 23071197

Intron Length:

5104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GCCTCTCTAATT

Flanking Amino Acid:

AQQFAETAHKLAMKHKC*

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.5

40.6

Major BPS

82.2

0.8

0.9

81.6

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

36.5

-1.5

3.6

48.1

Minor BPS

0.27

1.7

68.74

42.8

Associated Gene:

Gene:

STXBP6

Ensembl Gene ID:

ENSAPLG00000006792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046082

22999755 - 23071221

71467

ENSAPLT00000007050

22967055 - 23071638

104584