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Intron Name: Anas_platyrhynchos_platyrhynchos_5_23116363_23118235_F

Intron Information:

Intron Rank:

143309

Intron Class:

major

Intron Phase:

Intron Coordinates:

23116363 - 23118235

Intron Length:

1873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACATGA

5'SS Class:

major

3'SS Sequence:

TTCTCCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

GTTTCTCTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

68.7

39.1

Major BPS

78.6

0.71

79.6

32.9

Major PPT

83.3

0.75

0.7

77.6

24.3

Minor 5ss

42.8

-0.8

2.9

56.9

47.1

Minor BPS

0.61

1.6

80.02

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047566

23116247 - 23119486

3240