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Intron Name: Anas_platyrhynchos_platyrhynchos_5_23116561_23116758_F

Intron Information:

Intron Rank:

143306

Intron Class:

major

Intron Phase:

Intron Coordinates:

23116561 - 23116758

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCAAAT

U12 Branch Point Sequence:

GTAGCAGCAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

53.3

0.08

1.1

Major PPT

76.8

0.6

69.6

41.6

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

38.3

-0.8

2.3

56.71

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048128

23116437 - 23119474

3038

ENSAPLT00000043555

23116437 - 23118083

1647