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Intron Name: Anas_platyrhynchos_platyrhynchos_5_23117617_23117728_F

Intron Information:

Intron Rank:

143307

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23117617 - 23117728

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGCCACT

5'SS Class:

weak_major

3'SS Sequence:

CATGTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GCATGCTCAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.6

0.18

1.3

44.9

Major BPS

82.2

0.8

0.9

81.6

Major PPT

82.4

0.73

0.9

76.6

37.2

Minor 5ss

47.9

-0.2

66.9

38.2

Minor BPS

44.3

-0.4

2.1

53.36

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043555

23116437 - 23118083

1647