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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2326570_2328063_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2326570 - 2328063

Intron Length:

1494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAGAT

5'SS Class:

major

3'SS Sequence:

CCTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAGAA

U12 Branch Point Sequence:

GGTGTGAAAACT

Flanking Amino Acid:

SCLLTEHKEHRFRHLDEALQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.2

66.2

39.8

Major BPS

46.7

-0.2

0.9

39.1

Major PPT

88.3

0.86

0.7

83.5

24.7

Minor 5ss

36.6

-1.5

3.7

55.8

48.4

Minor BPS

38.7

-0.7

2.4

57.56

45.1

Associated Gene:

Gene:

TRIM66

Ensembl Gene ID:

ENSAPLG00000004186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004312

2323318 - 2353991

30674