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Intron Name: Anas_platyrhynchos_platyrhynchos_5_23275786_23276873_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23275786 - 23276873

Intron Length:

1088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TCTTCCTCAAAT

Flanking Amino Acid:

PSIVGRPRHQGVMVGMGQKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

34.8

Major BPS

71.6

0.54

33.1

Major PPT

93.1

0.97

0.5

93.2

15.7

Minor 5ss

33.3

-1.9

3.2

44.6

43.4

Minor BPS

70.9

0.73

1.6

85.81

40.1

Associated Gene:

Gene:

ACTC1

Ensembl Gene ID:

ENSAPLG00000009291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009675

23272452 - 23277022

4571